| AtomicList-summarization {IRanges} | R Documentation |
AtomicList summarization methods
Description
Operations from the Summary group generic and other summarization
operations on AtomicList objects.
Details
The following summarization operations are supported on AtomicList objects:
-
any,all,min,max,range,sum,prod -
mean,var,cov,cor,sd,median,quantile,mad,IQR -
which.max,which.min
See S4groupGeneric for more details.
Note that the which.min and which.max functions have an
extra argument, global=FALSE, which controls whether the returned
subscripts are global (compatible with the unlisted form of the input)
or local (compatible with the corresponding list element).
See Also
-
AtomicList_utils for common operations on AtomicList objects.
-
AtomicList objects.
Examples
x1 <- c(1L, 2L, 3L, 5L, 2L, 8L)
x2 <- c(15L, -5L, 80L, -1L, 15L, 79L, 20L, 5L)
il <- IntegerList(one=x1, x2)
sum(il) # equivalent to 'sapply(il, sum)'
mean(il) # equivalent to 'sapply(il, mean)'
range(il) # equivalent to 'sapply(il, range)'
which.max(il) # equivalent to 'sapply(il, which.max)'
[Package IRanges version 2.44.0 Index]