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libNuML 1.1.1
Library for reading / writing NuML documents
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This is the complete list of members for NUMLDocument, including all inherited members.
| accept(NUMLVisitor &v) const | NUMLDocument | virtual |
| appendAnnotation(const LIBSBML_CPP_NAMESPACE_QUALIFIER XMLNode *annotation) | NMBase | virtual |
| appendAnnotation(const std::string &annotation) | NMBase | virtual |
| appendNotes(const LIBSBML_CPP_NAMESPACE_QUALIFIER XMLNode *notes) | NMBase | |
| appendNotes(const std::string ¬es) | NMBase | |
| checkAnnotation() | NMBase | protected |
| checkDefaultNamespace(const LIBSBML_CPP_NAMESPACE_QUALIFIER XMLNamespaces *xmlns, const std::string &elementName) | NMBase | protected |
| checkNUMLListPopulated(NMBase *object) | NMBase | protected |
| checkOrderAndLogError(NMBase *object, int expected) | NMBase | protected |
| checkXHTML(const LIBSBML_CPP_NAMESPACE_QUALIFIER XMLNode *) | NMBase | protected |
| clone() const | NUMLDocument | virtual |
| conversion_errors(unsigned int errors) | NUMLDocument | protected |
| createObject(LIBSBML_CPP_NAMESPACE_QUALIFIER XMLInputStream &stream) | NUMLDocument | protectedvirtual |
| createOntologyTerm() | NUMLDocument | |
| createResultComponent() | NUMLDocument | |
| getAncestorOfType(NUMLTypeCode_t type) | NMBase | |
| getAnnotation() const | NMBase | |
| getAnnotationString() const | NMBase | |
| getColumn() const | NMBase | |
| getDefaultLevel() | NUMLDocument | static |
| getDefaultVersion() | NUMLDocument | static |
| getElementName() const | NUMLDocument | virtual |
| getElementPosition() const | NUMLDocument | virtual |
| getError(unsigned int n) const | NUMLDocument | |
| getErrorLog() | NUMLDocument | |
| getHasBeenDeleted() | NMBase | private |
| getId() const | NMBase | virtual |
| getLevel() const | NMBase | |
| getLine() const | NMBase | |
| getMetaId() const | NMBase | |
| getMetaId() | NMBase | |
| getName() const | NMBase | virtual |
| getNamespaces() const | NUMLDocument | virtual |
| getNotes() const | NMBase | |
| getNotesString() const | NMBase | |
| getNumErrors() const | NUMLDocument | |
| getNUMLDocument() const | NMBase | |
| getNUMLDocument() | NMBase | |
| getNUMLNamespaces() const | NMBase | |
| getNumOntologyTerms() const | NUMLDocument | |
| getNumResultComponents() const | NUMLDocument | |
| getOntologyTerms() | NUMLDocument | |
| getOntologyTerms() const | NUMLDocument | |
| getParentNUMLObject() | NMBase | |
| getResultComponent(unsigned int index) | NUMLDocument | |
| getResultComponents() | NUMLDocument | |
| getResultComponents() const | NUMLDocument | |
| getTypeCode() const | NUMLDocument | virtual |
| getVersion() const | NMBase | |
| hasRequiredAttributes() const | NMBase | virtual |
| hasRequiredElements() const | NMBase | virtual |
| hasStrictSBO() | NUMLDocument | protected |
| hasStrictUnits() | NUMLDocument | protected |
| hasValidLevelVersionNamespaceCombination() | NMBase | |
| isSetAnnotation() const | NMBase | |
| isSetMetaId() const | NMBase | |
| isSetName() const | NMBase | |
| isSetNotes() const | NMBase | |
| logEmptyString(std::string attribute, const unsigned int level, const unsigned int version, std::string element) | NMBase | protected |
| logError(unsigned int id, const unsigned int level=2, const unsigned int version=3, const std::string &details="") | NMBase | protected |
| logUnknownAttribute(std::string attribute, const unsigned int level, const unsigned int version, const std::string element) | NMBase | protected |
| logUnknownElement(const std::string element, const unsigned int level, const unsigned int version) | NMBase | protected |
| mAnnotation | NMBase | protected |
| mApplicableValidators | NUMLDocument | protected |
| mApplicableValidatorsForConversion | NUMLDocument | protected |
| mColumn | NMBase | protected |
| mDept | NMBase | protected |
| mEmptyString | NMBase | protected |
| mErrorLog | NUMLDocument | protected |
| mHasBeenDeleted | NMBase | protected |
| mId | NMBase | protected |
| mLevel | NUMLDocument | protected |
| mLine | NMBase | protected |
| mMetaId | NMBase | protected |
| mName | NMBase | protected |
| mNotes | NMBase | protected |
| mNUML | NMBase | protected |
| mNUMLNamespaces | NMBase | protected |
| mOntologyTerms | NUMLDocument | protected |
| mParentNUMLObject | NMBase | protected |
| mResultComponents | NUMLDocument | protected |
| mVersion | NUMLDocument | protected |
| NMBase class | NUMLDocument | friend |
| NMBase::NMBase(const std::string &id="", const std::string &name="") | NMBase | protected |
| NMBase::NMBase(unsigned int level, unsigned int version) | NMBase | protected |
| NMBase::NMBase(NUMLNamespaces *numlns) | NMBase | protected |
| NMBase::NMBase(const NMBase &orig) | NMBase | protected |
| NUMLDocument(unsigned int level=0, unsigned int version=0) | NUMLDocument | |
| NUMLDocument(const NUMLDocument &rhs) | NUMLDocument | |
| NUMLReader class | NUMLDocument | friend |
| operator=(const NMBase &orig) | NMBase | |
| printErrors(std::ostream &stream=std::cerr) const | NUMLDocument | |
| read(LIBSBML_CPP_NAMESPACE_QUALIFIER XMLInputStream &stream) | NMBase | |
| readAnnotation(LIBSBML_CPP_NAMESPACE_QUALIFIER XMLInputStream &stream) | NMBase | private |
| readAttributes(const LIBSBML_CPP_NAMESPACE_QUALIFIER XMLAttributes &attributes) | NUMLDocument | protectedvirtual |
| readNotes(LIBSBML_CPP_NAMESPACE_QUALIFIER XMLInputStream &stream) | NMBase | private |
| readOtherXML(LIBSBML_CPP_NAMESPACE_QUALIFIER XMLInputStream &stream) | NMBase | protectedvirtual |
| removeTopLevelAnnotationElement(const std::string elementName, const std::string elementURI="") | NMBase | |
| replaceTopLevelAnnotationElement(const LIBSBML_CPP_NAMESPACE_QUALIFIER XMLNode *annotation) | NMBase | |
| replaceTopLevelAnnotationElement(const std::string &annotation) | NMBase | |
| setAnnotation(const LIBSBML_CPP_NAMESPACE_QUALIFIER XMLNode *annotation) | NMBase | virtual |
| setAnnotation(const std::string &annotation) | NMBase | virtual |
| setId(const std::string &sid) | NMBase | virtual |
| setLevelAndVersion(unsigned int level, unsigned int version, bool strict=true) | NUMLDocument | |
| setMetaId(const std::string &metaid) | NMBase | |
| setNamespaces(LIBSBML_CPP_NAMESPACE_QUALIFIER XMLNamespaces *xmlns) | NMBase | |
| setNMBaseFields(const LIBSBML_CPP_NAMESPACE_QUALIFIER XMLToken &element) | NMBase | private |
| setNotes(const LIBSBML_CPP_NAMESPACE_QUALIFIER XMLNode *notes) | NMBase | |
| setNotes(const std::string ¬es, bool addXHTMLMarkup=false) | NMBase | |
| setNUMLDocument(NUMLDocument *d) | NUMLDocument | virtual |
| setNUMLNamespaces(NUMLNamespaces *numlns) | NMBase | |
| setParentNUMLObject(NMBase *sb) | NUMLDocument | virtual |
| syncAnnotation() | NMBase | |
| toNUML() | NMBase | |
| unsetAnnotation() | NMBase | |
| unsetMetaId() | NMBase | |
| unsetNotes() | NMBase | |
| write(LIBSBML_CPP_NAMESPACE_QUALIFIER XMLOutputStream &stream) const | NMBase | |
| writeAttributes(LIBSBML_CPP_NAMESPACE_QUALIFIER XMLOutputStream &stream) const | NUMLDocument | protectedvirtual |
| writeElements(LIBSBML_CPP_NAMESPACE_QUALIFIER XMLOutputStream &stream) const | NUMLDocument | virtual |
| writeXMLNS(LIBSBML_CPP_NAMESPACE_QUALIFIER XMLOutputStream &stream) const | NMBase | protectedvirtual |
| ~NMBase() | NMBase | virtual |
| ~NUMLDocument() | NUMLDocument | virtual |